gg_Marker

Creates a marker plot with myG and myY objects.

Usage

gg_Marker_Bar(
  xG,
  xY,
  traits,
  markers,
  plot.histogram = T,
  plot.density = T,
  marker.colors = c("darkgreen", "darkgoldenrod3", "darkred", "steelblue4",
    "darkslategray", "maroon4", "purple4", "darkblue"),
  myncol = NULL,
  line.color = F
)

Arguments

xG

GWAS genotype object. Note: needs to be in hapmap format.

xY

GWAS phenotype object.

traits

Traits to plot.

markers

Markers to plot.

marker.colors

Color palette.

Value

Marker plot.