gg_Marker_Box — gg_Marker

Creates a marker plot with myG and myY objects.

Usage

gg_Marker_Box(
  xG,
  xY,
  traits,
  markers,
  marker.colors = gwaspr_Colors,
  plot.violin = T,
  plot.points = T,
  box.width = 0.1,
  point.size = 1,
  myncol = NULL,
  title = NULL
)

Arguments

xG: GWAS genotype object. Note: needs to be in hapmap format.
xY: GWAS phenotype object.
traits: Traits to plot.
markers: Markers to plot.
marker.colors: Color palette.
plot.violin: Logical, whether or not to plot violin.
plot.points: Logical, whether or not to plot points.
box.width: Width for the boxplot.
point.size: Size for the points.
myncol: Number of columns for facetting when plotting multiple traits.
title: Title for the plot.

Value

Marker plot.