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gg_NYCvsKansas

Source: R/gg_NYCvsKansas.R
gg_NYCvsKansas.Rd

Creates a manhattan plot comparing the NYC and Kansas results.

Usage

gg_NYCvsKansas(
  folder = "GWAS_Results/",
  trait = list_Traits(folder)[1],
  title = trait,
  threshold = NULL,
  chr.colors = rep(c("darkgreen", "darkgoldenrod3"), 30),
  chr.unit = "100 Mbp"
)

Arguments

folder

Folder containing GWAS results.

trait

The trait to read.

title

A title for the plot.

threshold

Significant Threshold.

chr.colors

Colors for each chromosome.

chr.unit

Unit for the x-axis. Can be one of c("kbp","100 kbp","Mbp","100 Mbp","Gbp").

Value

A manhattan plot.