Usage
gg_Volcano(
folder = "GWAS_Results/",
trait = list_Traits(folder)[1],
title = trait,
markers = NULL,
labels = markers,
models = c("MLM", "FarmCPU", "BLINK", "MLMM", "GLM", "CMLM", "SUPER"),
threshold = NULL,
skyline = "NYC"
)Arguments
- folder
Folder containing GWAS results.
- trait
The trait to read.
- title
A title for the plot.
- markers
Markers to be labelled.
- labels
Labels to be used for markers.
- models
Models to read.
- threshold
Significant Threshold.
- skyline
Which skyline type to use. Can be "NYC" or "Kansas". If NULL, it will use the highest P.value.