Create a table of significant GWAS results.
Usage
table_GWAS_Results(
folder = "GWAS_Results/",
fnames = list_Result_Files(folder),
threshold = 6,
sug.threshold = NULL,
nrowstoread = 1000,
skyline = "NYC",
models = c("MLM", "MLMM", "FarmCPU", "BLINK", "GLM", "CMLM", "SUPER")
)
Arguments
- folder
Folder containing GWAS results.
- fnames
The files to read.
- threshold
Significant threshold.
- sug.threshold
Suggestive threshold.
- nrowstoread
Number of rows to read.
- skyline
Which skyline type to use. Can be "NYC" or "Kansas". If NULL, it will use the highest P.value.
- models
GWAS models to use.
Value
A table of significant GWAS results.