table_GWAS_Results — table_GWAS_Results • gwaspr

Create a table of significant GWAS results.

Usage

table_GWAS_Results(
  folder = "GWAS_Results/",
  fnames = list_Result_Files(folder),
  nrowstoread = 1000,
  threshold = 6,
  sug.threshold = NULL,
  skyline = NULL
)

Arguments

folder: Folder containing GWAS results.
fnames: The files to read.
nrowstoread: Number of rows to read.
threshold: Significant threshold.
sug.threshold: Suggestive threshold.
skyline: Which skyline type to use. Can be "NYC" or "Kansas". If left NULL, it will use the highest P.value.
useHBPvalues: Logical, if TRUE, H.B.P.Values will be uses.

Value

A table of significant GWAS results.